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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45278.1Hypothetical protein; COG0419 ATPase involved in DNA repair. (258 aa)    
Predicted Functional Partners:
EDM44531.1
Hypothetical protein.
  
     0.766
EDM43036.1
Hypothetical protein.
  
     0.759
EDM43273.1
Hypothetical protein.
  
     0.758
EDM43079.1
Hypothetical protein; COG1452 Organic solvent tolerance protein OstA.
  
     0.746
EDM44095.1
Hypothetical protein.
  
     0.745
EDM45467.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.713
EDM42827.1
Hypothetical protein.
  
     0.706
EDM45595.1
COG1538 Outer membrane protein.
  
     0.664
EDM43573.1
Hypothetical protein.
  
     0.664
EDM45250.1
Hypothetical protein.
  
     0.631
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.