| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDM42916.1 | EDM43258.1 | SCB49_11487 | SCB49_00847 | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | 0.882 |
| EDM42916.1 | rnc | SCB49_11487 | SCB49_05390 | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.765 |
| EDM42916.1 | rnpA | SCB49_11487 | SCB49_05902 | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.840 |
| EDM42916.1 | ruvA | SCB49_11487 | SCB49_04535 | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.884 |
| EDM42916.1 | uvrC | SCB49_11487 | SCB49_06732 | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.788 |
| EDM43258.1 | EDM42916.1 | SCB49_00847 | SCB49_11487 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.882 |
| EDM43258.1 | rnc | SCB49_00847 | SCB49_05390 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.765 |
| EDM43258.1 | rnpA | SCB49_00847 | SCB49_05902 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.840 |
| EDM43258.1 | ruvA | SCB49_00847 | SCB49_04535 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.884 |
| EDM43258.1 | uvrC | SCB49_00847 | SCB49_06732 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.756 |
| EDM44823.1 | rnpA | SCB49_01844 | SCB49_05902 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.932 |
| EDM44823.1 | rpmH | SCB49_01844 | SCB49_00175 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Thiol-disulfide oxidoreductase; Belongs to the bacterial ribosomal protein bL34 family. | 0.458 |
| EDM44823.1 | yidC | SCB49_01844 | SCB49_00475 | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.813 |
| pnp | rnpA | SCB49_09295 | SCB49_05902 | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.843 |
| pnp | rpsJ | SCB49_09295 | SCB49_09495 | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.737 |
| pnp | yidC | SCB49_09295 | SCB49_00475 | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.531 |
| rnc | EDM42916.1 | SCB49_05390 | SCB49_11487 | Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.765 |
| rnc | EDM43258.1 | SCB49_05390 | SCB49_00847 | Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | 0.765 |
| rnc | rnpA | SCB49_05390 | SCB49_05902 | Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.803 |
| rnc | rpsJ | SCB49_05390 | SCB49_09495 | Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.830 |
