STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45327.1COG3594 Fucose 4-O-acetylase and related acetyltransferases. (330 aa)    
Predicted Functional Partners:
EDM45328.1
COG2194 Predicted membrane-associated, metal-dependent hydrolase.
       0.773
EDM45326.1
COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
       0.746
EDM45325.1
Putative dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.532
EDM42975.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
  0.481
EDM45329.1
Hypothetical protein.
       0.465
EDM45330.1
Hypothetical protein; COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1.
       0.465
EDM45331.1
Hypothetical protein.
       0.465
EDM42983.1
Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
  
 0.414
EDM43003.1
Putative EPS related membrane protein; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
  
 0.414
EDM42984.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
    0.400
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.