STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45337.1Hypothetical protein. (451 aa)    
Predicted Functional Partners:
EDM45335.1
Hypothetical protein.
       0.773
EDM45336.1
Hypothetical protein.
       0.773
EDM44652.1
Probable extracellular nuclease; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
  
  0.693
EDM45228.1
Hypothetical protein.
  
 
  0.649
EDM43615.1
COG3979 Uncharacterized protein contain chitin-binding domain type 3.
  
     0.556
EDM45628.1
COG5651 PPE-repeat proteins.
  
     0.551
EDM42854.1
Hypothetical protein; COG2951 Membrane-bound lytic murein transglycosylase B.
  
     0.538
EDM45441.1
Hypothetical protein.
  
     0.517
EDM44725.1
Hypothetical protein.
  
     0.509
EDM45121.1
Hypothetical protein.
  
     0.506
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.