Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDM45381.1COG1309 Transcriptional regulator. (203 aa)    
Predicted Functional Partners:
EDM45380.1
Polyunsaturated fatty acid synthase PfaA; COG3321 Polyketide synthase modules and related proteins.
 
   
 0.898
EDM45379.1
Polyunsaturated fatty acid synthase PfaA; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.883
EDM45378.1
Hypothetical protein; COG3321 Polyketide synthase modules and related proteins; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
 0.869
EDM45382.1
Surfactin biosynthesis-related protein, SFP; COG2091 Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
     0.867
EDM43809.1
Putative outer membrane receptor protein.
  
     0.615
EDM43810.1
Putative outer membrane protein probably involved in nutrient binding; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.603
EDM43876.1
COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH).
  
     0.585
EDM45377.1
2-nitropropane dioxygenase, NPD; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
 
  
  0.555
EDM45257.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 
 0.541
EDM43586.1
phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 
 0.541
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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