STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45408.1Membrane-associated zinc metalloprotease; COG0750 Predicted membrane-associated Zn-dependent proteases 1. (446 aa)    
Predicted Functional Partners:
EDM45690.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
  
 0.706
EDM45691.1
Undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
  
 0.680
EDM43780.1
COG4775 Outer membrane protein/protective antigen OMA87.
 
  
 0.623
EDM43811.1
Outer membrane protein; COG0419 ATPase involved in DNA repair.
  
  
 0.559
EDM43220.1
Outer membrane protein; COG1409 Predicted phosphohydrolases.
  
  
 0.559
EDM45409.1
COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
       0.539
EDM45224.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.532
EDM45616.1
Hypothetical protein.
  
    0.500
EDM45688.1
COG2825 Outer membrane protein.
 
    0.485
yidC
Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
   
 0.472
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.