Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDM45433.1COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. (174 aa)    
Predicted Functional Partners:
EDM43717.1
Putative chorismate mutase; COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase.
    
  0.776
EDM45431.1
COG3012 Uncharacterized protein conserved in bacteria.
       0.773
EDM45432.1
COG0408 Coproporphyrinogen III oxidase.
       0.773
EDM45434.1
Hypothetical protein.
       0.773
EDM45435.1
Hypothetical protein.
       0.732
hemE
Uroporphyrinogen-III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
       0.732
EDM45437.1
DNA methylase, putative; COG2852 Uncharacterized protein conserved in bacteria.
       0.643
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
    
  0.618
EDM42946.1
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
 
  0.570
EDM43545.1
Pigmentation and extracellular proteinase regulator; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
 
  0.570
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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