STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45441.1Hypothetical protein. (500 aa)    
Predicted Functional Partners:
EDM45313.1
Hypothetical protein.
  
     0.554
EDM45444.1
Hypothetical protein.
 
     0.551
EDM43177.1
Hypothetical protein.
 
     0.544
EDM45337.1
Hypothetical protein.
  
     0.517
EDM43800.1
Hypothetical protein.
  
 
  0.510
EDM44243.1
Hypothetical protein.
  
 
  0.499
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.487
EDM45443.1
Uncharacterized membrane protein; COG0534 Na+-driven multidrug efflux pump.
       0.478
EDM44463.1
COG4886 Leucine-rich repeat (LRR) protein.
  
  
  0.475
EDM42984.1
COG1596 Periplasmic protein involved in polysaccharide export.
     
  0.471
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.