STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45457.1Zinc ABC transporter, ATP-binding protein; COG1121 ABC-type Mn/Zn transport systems, ATPase component. (245 aa)    
Predicted Functional Partners:
EDM45456.1
Zinc ABC transporter, periplasmic zinc-binding protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.998
EDM45458.1
Hypothetical protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 0.998
EDM45459.1
Hypothetical protein; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 0.998
EDM45455.1
COG1321 Mn-dependent transcriptional regulator.
  
 
 0.904
EDM45109.1
COG1321 Mn-dependent transcriptional regulator.
  
 
 0.662
EDM45460.1
Hypothetical protein.
       0.618
EDM43103.1
Hypothetical protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
     
 0.556
EDM43411.1
iron(III) ABC transporter, permease protein, putative; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    
 0.549
EDM43450.1
Cytochrome c assembly protein; COG1609 Transcriptional regulators.
  
 
  0.543
EDM45305.1
Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
 
  0.496
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.