STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45476.1COG4771 Outer membrane receptor for ferrienterochelin and colicins. (886 aa)    
Predicted Functional Partners:
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
     
  0.601
EDM42918.1
CHU large protein; uncharacterized.
  
    0.571
EDM44725.1
Hypothetical protein.
  
 
   0.568
EDM42919.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.555
EDM44346.1
Hypothetical protein.
  
 
   0.546
EDM45506.1
CHU large protein; uncharacterized.
  
 
   0.538
EDM45621.1
CHU large protein; uncharacterized.
  
     0.515
obgE
GTPase ObgE.
  
     0.510
EDM45475.1
Hypothetical protein.
       0.503
EDM45477.1
Peptidase, M23/M37 family protein; COG0739 Membrane proteins related to metalloendopeptidases.
       0.500
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.