Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDM45517.1Component of SufBCD complex. (130 aa)    
Predicted Functional Partners:
EDM45516.1
Iron-regulated ABC transporter, ATP-binding protein; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
       0.802
EDM45518.1
Iron-regulated ABC transporter, membrane-spanning permease; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
       0.649
EDM45515.1
Iron-regulated ABC transporter, membrane-spanning permease; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
       0.579
EDM45513.1
COG2166 SufE protein probably involved in Fe-S center assembly.
       0.525
EDM45512.1
COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
       0.524
EDM45514.1
Cysteine desulfurase, SufS subfamily protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.519
EDM45511.1
Hypothetical protein.
       0.510
EDM45519.1
Scaffold protein for iron-sulphur cluster assembly; Belongs to the HesB/IscA family.
       0.501
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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