Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45522.1PKD; COG5651 PPE-repeat proteins. (481 aa)    
Predicted Functional Partners:
EDM45523.1
Regulatory P domain of the subtilisin-like proprotein convertases and other protease.
     0.948
EDM45520.1
COG1858 Cytochrome c peroxidase.
 
     0.811
EDM45521.1
Hypothetical protein.
       0.732
EDM43800.1
Hypothetical protein.
  
 
  0.525
EDM44030.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
  0.516
EDM44243.1
Hypothetical protein.
  
 
  0.502
EDM45509.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
  
  0.501
EDM42938.1
Thermophilic serine proteinase; COG1404 Subtilisin-like serine proteases.
  
 
  0.478
EDM44652.1
Probable extracellular nuclease; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
  
  0.476
EDM42984.1
COG1596 Periplasmic protein involved in polysaccharide export.
     
  0.471
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.