STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45535.1Hypothetical protein; COG1100 GTPase SAR1 and related small G proteins. (166 aa)    
Predicted Functional Partners:
EDM45075.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
    
 0.929
EDM45536.1
OmpA/MotB; COG0419 ATPase involved in DNA repair.
 
     0.901
EDM45565.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
 
 
 0.893
EDM44333.1
Ankyrin; COG0666 FOG: Ankyrin repeat.
 
 
 0.879
EDM43445.1
Hypothetical protein.
   
 0.860
EDM45097.1
Hypothetical protein.
   
 0.859
EDM44434.1
Hypothetical protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
   
 0.859
EDM45591.1
COG0038 Chloride channel protein EriC.
   
 0.857
EDM45534.1
Hybrid sensory kinase; COG0642 Signal transduction histidine kinase.
 
 
  0.844
EDM44685.1
Putative adenylate/guanylate cyclase; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
 
 0.822
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.