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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45541.1COG3176 Putative hemolysin. (606 aa)    
Predicted Functional Partners:
EDM45203.1
Hypothetical protein.
  
     0.732
EDM45540.1
Aspartate kinase III; COG0527 Aspartokinases; Belongs to the aspartokinase family.
       0.646
EDM43419.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.579
EDM44740.1
Hypothetical protein.
  
    0.570
EDM44851.1
Hypothetical protein.
  
     0.549
EDM45539.1
GCN5-related N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.526
EDM44984.1
Hypothetical protein.
  
     0.524
EDM45115.1
COG1577 Mevalonate kinase.
  
     0.504
EDM45542.1
COG2766 Putative Ser protein kinase.
       0.497
EDM44974.1
Hypothetical protein.
  
     0.443
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.