Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45552.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
EDM44790.1
Antibiotic biosynthesis monooxygenase domain protein.
  
     0.632
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.590
EDM45550.1
Putative transmembrane Mg2+ transporter; Acts as a magnesium transporter.
       0.589
EDM45553.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.578
EDM43439.1
Hypothetical protein.
  
     0.562
EDM44764.1
Hypothetical protein.
  
     0.523
EDM43792.1
COG3239 Fatty acid desaturase.
  
     0.490
EDM43161.1
Hypothetical protein.
  
     0.482
EDM43518.1
Hypothetical protein.
  
     0.480
EDM45554.1
COG0172 Seryl-tRNA synthetase.
       0.461
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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