STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45561.1COG1629 Outer membrane receptor proteins, mostly Fe transport. (708 aa)    
Predicted Functional Partners:
EDM45562.1
Hypothetical protein.
 
     0.955
EDM45563.1
Hypothetical protein.
 
     0.905
EDM45564.1
Hypothetical protein.
 
     0.865
EDM44507.1
Hypothetical secreted protein.
  
 
  0.761
EDM45565.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
 
     0.744
EDM45566.1
Hypothetical protein.
 
     0.738
EDM45567.1
Putative Oxidoreductase, FAD-binding protein; COG3182 Uncharacterized iron-regulated membrane protein.
 
     0.710
EDM44551.1
OmpA domain protein; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.650
EDM45568.1
Hypothetical protein; COG0542 ATPases with chaperone activity, ATP-binding subunit.
       0.647
EDM44392.1
COG3047 Outer membrane protein W.
     
  0.620
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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