STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45575.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
EDM44836.1
Hypothetical protein.
  
     0.766
EDM43659.1
COG1587 Uroporphyrinogen-III synthase.
  
     0.742
EDM44706.1
Hypothetical protein.
  
     0.730
EDM44039.1
Hypothetical protein; COG2317 Zn-dependent carboxypeptidase.
  
     0.679
EDM44331.1
Hypothetical protein.
  
     0.627
EDM44224.1
COG1843 Flagellar hook capping protein.
  
   0.623
EDM43270.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.619
EDM44983.1
Hypothetical protein.
  
     0.615
EDM45058.1
Putative outer membrane protein; COG2067 Long-chain fatty acid transport protein.
 
     0.606
EDM44794.1
Hypothetical protein.
  
     0.573
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.