STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45578.1Hypothetical protein. (232 aa)    
Predicted Functional Partners:
EDM44432.1
Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.
  
     0.485
EDM45684.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.484
EDM45579.1
Hypothetical protein; COG0306 Phosphate/sulphate permeases.
       0.454
EDM43247.1
Hypothetical protein.
  
     0.441
EDM43704.1
Hypothetical protein.
  
     0.421
EDM43352.1
Beta-lactamase; COG0457 FOG: TPR repeat.
  
     0.404
EDM43504.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
      0.403
EDM45576.1
COG0209 Ribonucleotide reductase, alpha subunit.
       0.402
EDM45577.1
COG0209 Ribonucleotide reductase, alpha subunit.
       0.402
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.