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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45581.1COG2849 Uncharacterized protein conserved in bacteria. (118 aa)    
Predicted Functional Partners:
EDM43024.1
COG0308 Aminopeptidase N.
  
     0.760
EDM44023.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.746
EDM45678.1
Hypothetical protein.
  
     0.722
EDM43116.1
Hypothetical protein.
  
     0.703
EDM45144.1
Hypothetical protein.
  
     0.696
EDM44081.1
Ribonuclease Z.
  
     0.696
EDM45673.1
Hypothetical protein.
  
     0.683
EDM42891.1
Hypothetical protein.
  
     0.640
EDM44053.1
Hypothetical protein.
  
     0.638
valS
valyl-tRNA synthetase; COG4281 Acyl-CoA-binding protein.
  
     0.637
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.