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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45595.1COG1538 Outer membrane protein. (457 aa)    
Predicted Functional Partners:
EDM45594.1
Cation efflux system protein/acriflavin resistance protein B family; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.963
EDM45593.1
COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.905
EDM45596.1
Transcriptional regulator, tetR family protein; COG1309 Transcriptional regulator.
 
     0.813
EDM44970.1
Secretion protein HlyD; COG0845 Membrane-fusion protein.
  
  0.782
EDM43036.1
Hypothetical protein.
  
     0.764
EDM44992.1
Acriflavin resistance protein AcrE, putative; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.760
EDM44921.1
Multidrug resistance protein, AcrA/AcrE family; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.744
EDM44095.1
Hypothetical protein.
  
     0.743
EDM44531.1
Hypothetical protein.
  
     0.734
EDM45467.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.707
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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