STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDM45602.1Sensory transduction histidine kinase; COG0457 FOG: TPR repeat. (669 aa)    
Predicted Functional Partners:
EDM45601.1
Two component transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.969
EDM45619.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.872
EDM43578.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.872
EDM43748.1
Two component transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.872
EDM44613.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  0.871
EDM45173.1
Sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
    
 0.621
EDM45603.1
Hypothetical protein; COG3577 Predicted aspartyl protease.
       0.581
EDM45221.1
COG0642 Signal transduction histidine kinase.
  
 0.545
EDM42881.1
Sensor histidine kinase/GAF domain hybrid protein; COG2203 FOG: GAF domain.
  
  0.536
EDM43866.1
Two-component system sensor histidine kinase; COG0642 Signal transduction histidine kinase.
  
 0.534
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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