STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45627.1COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). (346 aa)    
Predicted Functional Partners:
EDM43399.1
ARA1; COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
0.790
EDM44414.1
COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
   
  0.728
EDM44461.1
GGDEF domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain.
    
  0.717
EDM43275.1
Aquaporin Z; COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.616
EDM44858.1
Major intrinsic protein; COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.616
EDM43971.1
Putative O-succinylbenzoate--CoA ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
 0.599
EDM44499.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
 0.599
EDM44313.1
Glucose-methanol-choline oxidoreductase; COG2303 Choline dehydrogenase and related flavoproteins.
    
  0.571
EDM44269.1
COG2124 Cytochrome P450.
     
 0.555
EDM45628.1
COG5651 PPE-repeat proteins.
       0.546
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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