STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45633.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
EDM43619.1
Hypothetical protein; COG4929 Uncharacterized membrane-anchored protein.
  
     0.669
EDM43618.1
COG4872 Predicted membrane protein.
  
     0.656
EDM43097.1
Hypothetical protein.
  
     0.476
EDM43959.1
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain, putative; COG2866 Predicted carboxypeptidase.
  
 
  0.470
EDM45110.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.434
EDM45467.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.430
EDM44943.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.410
EDM44149.1
Peptidase E.
  
     0.407
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.