Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45636.1Hypothetical protein. (174 aa)    
Predicted Functional Partners:
EDM43540.1
Hypothetical protein; COG0711 F0F1-type ATP synthase, subunit b.
  
     0.654
EDM44353.1
COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.647
EDM45011.1
Hypothetical protein.
  
     0.517
EDM44186.1
Hypothetical protein; COG2373 Large extracellular alpha-helical protein.
  
     0.508
EDM44570.1
Hypothetical protein.
  
     0.492
EDM44227.1
Hypothetical protein.
  
     0.489
EDM45634.1
Hypothetical protein.
       0.470
EDM45635.1
COG2268 Uncharacterized protein conserved in bacteria.
       0.470
EDM45510.1
Hypothetical protein.
  
     0.465
EDM44886.1
Hypothetical protein.
  
     0.452
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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