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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45665.1COG1538 Outer membrane protein. (442 aa)    
Predicted Functional Partners:
EDM45664.1
Membrane fusion efflux protein, putative; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.978
EDM45666.1
Methyl-accepting chemotaxis sensory transducer; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.886
EDM45663.1
Putative glycoprotease family exported protein; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.
       0.782
EDM45667.1
ABC transporter, permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
  0.764
EDM45668.1
ABC transporter, permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
  0.762
EDM45594.1
Cation efflux system protein/acriflavin resistance protein B family; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.733
EDM43465.1
ABC transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
  0.723
EDM43391.1
COG0845 Membrane-fusion protein.
   
  0.688
EDM44921.1
Multidrug resistance protein, AcrA/AcrE family; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.676
EDM44970.1
Secretion protein HlyD; COG0845 Membrane-fusion protein.
   
  0.676
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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