STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45672.1COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. (231 aa)    
Predicted Functional Partners:
EDM45671.1
COG2322 Predicted membrane protein.
    0.961
EDM44274.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.926
EDM45670.1
Hypothetical protein.
       0.809
EDM45673.1
Hypothetical protein.
       0.809
ctaB
Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
 0.787
EDM44273.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.751
EDM45679.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
 
  0.715
EDM44720.1
Cytochrome oxidase assembly; COG1612 Uncharacterized protein required for cytochrome oxidase assembly.
 
 0.660
EDM45680.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
 
  0.648
EDM43172.1
Thioredoxin, putative; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
   0.594
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.