STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45676.1ABC transporter ATP-binding protein; COG0419 ATPase involved in DNA repair. (448 aa)    
Predicted Functional Partners:
EDM45675.1
Membrane-bound O-acyltransferase; COG1696 Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.
    
  0.620
EDM45677.1
Membrane-bound O-acyltransferase; COG1696 Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.
    
  0.607
EDM45674.1
ABC transporter ATP-binding protein.
      
0.576
EDM44647.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
     
 0.517
EDM45678.1
Hypothetical protein.
       0.461
EDM45679.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
       0.408
EDM45670.1
Hypothetical protein.
       0.403
EDM45671.1
COG2322 Predicted membrane protein.
       0.403
EDM45672.1
COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
       0.403
EDM45673.1
Hypothetical protein.
       0.403
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.