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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppnKInorganic polyphosphate/ATP-NAD kinase. (229 aa)    
Predicted Functional Partners:
EDM45689.1
Outer membrane protein, ompH family; COG2825 Outer membrane protein.
   
   0.826
EDM45690.1
COG4775 Outer membrane protein/protective antigen OMA87.
   
   0.815
EDM45691.1
Undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
    0.793
EDM45694.1
Hypothetical protein; COG0517 FOG: CBS domain.
 
     0.793
EDM43539.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
  
 
 0.761
EDM45258.1
Gliding motility-related protein; COG0457 FOG: TPR repeat.
  
     0.757
EDM45688.1
COG2825 Outer membrane protein.
   
   0.752
EDM45509.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
  
 
 0.743
EDM43311.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
  
 
 0.724
EDM44690.1
COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
  
     0.722
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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