Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45706.1COG2982 Uncharacterized protein involved in outer membrane biogenesis. (875 aa)    
Predicted Functional Partners:
EDM43076.1
Hypothetical protein.
  
  
 0.837
EDM43163.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.692
EDM43209.1
Hypothetical protein.
  
     0.664
EDM43035.1
Hypothetical protein.
  
     0.615
EDM44764.1
Hypothetical protein.
  
     0.599
EDM44262.1
TonB; COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
     0.565
EDM43508.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; COG0419 ATPase involved in DNA repair.
  
     0.564
EDM45259.1
COG1664 Integral membrane protein CcmA involved in cell shape determination.
  
     0.553
EDM44012.1
Fused predicted transporter subunit of ABC superfamily: ATP-binding component.
  
     0.543
EDM43930.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.525
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.