STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45714.1Hypothetical protein; COG1512 Beta-propeller domains of methanol dehydrogenase type. (273 aa)    
Predicted Functional Partners:
EDM45715.1
COG3762 Predicted membrane protein.
 
     0.902
EDM45716.1
Hypothetical protein.
 
    0.894
EDM44273.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
   0.789
EDM44274.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
   0.783
EDM44358.1
COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase.
  
  
 0.750
EDM45679.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 
   0.702
EDM45680.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 
   0.680
EDM44359.1
COG4260 Putative virion core protein (lumpy skin disease virus).
  
  
 0.627
EDM44669.1
COG2032 Cu/Zn superoxide dismutase.
    
   0.510
EDM45717.1
COG0789 Predicted transcriptional regulators.
       0.477
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.