STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45728.1Hypothetical protein. (312 aa)    
Predicted Functional Partners:
EDM45729.1
Hypothetical protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
       0.505
EDM45724.1
Hypothetical protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
       0.404
EDM45725.1
COG0419 ATPase involved in DNA repair.
       0.404
EDM45726.1
Hypothetical protein.
       0.404
EDM45727.1
Hypothetical protein; COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.
       0.404
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.