Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDM45729.1Hypothetical protein; COG0790 FOG: TPR repeat, SEL1 subfamily. (224 aa)    
Predicted Functional Partners:
EDM44414.1
COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
    
  0.872
EDM44935.1
Holliday junction DNA helicase; COG0515 Serine/threonine protein kinase; Belongs to the AAA ATPase family.
 
 
 0.847
EDM44944.1
Hypothetical protein; COG0465 ATP-dependent Zn proteases.
   
 0.800
EDM44934.1
COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.781
EDM44932.1
Heat shock protein Hsp70; COG0443 Molecular chaperone.
 
 
 0.778
EDM43338.1
Hypothetical protein; COG0457 FOG: TPR repeat.
   
 0.771
EDM44004.1
Heat shock protein Hsp70; COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
   
 0.749
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.749
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
 
  0.677
rpsO-2
Putative 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
     
  0.674
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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