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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phhACOG3186 Phenylalanine-4-hydroxylase. (582 aa)    
Predicted Functional Partners:
phhB
COG2154 Pterin-4a-carbinolamine dehydratase.
  
 0.926
EDM45480.1
COG3508 Homogentisate 1,2-dioxygenase.
 
  
 0.857
EDM43582.1
Rhodanese-like domain protein; COG0607 Rhodanese-related sulfurtransferase.
       0.773
EDM43717.1
Putative chorismate mutase; COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase.
     
 0.770
EDM45153.1
COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins.
 
  
 0.703
EDM43586.1
phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
    
  0.672
EDM44112.1
COG2986 Histidine ammonia-lyase.
   
 
 0.596
hisC
COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.591
EDM45478.1
COG3483 Tryptophan 2,3-dioxygenase (vermilion).
   
 
 0.587
EDM45213.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
 
 0.573
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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