STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDM43588.1Phenylacetic acid degradation B; COG3460 Uncharacterized enzyme of phenylacetate metabolism. (94 aa)    
Predicted Functional Partners:
EDM43587.1
Phenylacetate-CoA oxygenase, PaaG subunit.
 0.998
EDM43589.1
Predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
 0.998
EDM43586.1
phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
 0.993
EDM43590.1
Ring-hydroxylation complex protein 3; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
 
 0.987
EDM45257.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
 0.986
EDM43595.1
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
 
 0.952
EDM43597.1
Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases.
 
  
 0.914
EDM43591.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.898
EDM44279.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.867
EDM45512.1
COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
  
 
 0.779
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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