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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43595.1COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. (144 aa)    
Predicted Functional Partners:
EDM43589.1
Predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation.
 
 
 0.919
EDM43590.1
Ring-hydroxylation complex protein 3; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
 
 0.917
EDM43597.1
Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases.
 
 
 0.917
EDM43588.1
Phenylacetic acid degradation B; COG3460 Uncharacterized enzyme of phenylacetate metabolism.
 
 
 0.890
EDM43587.1
Phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.870
EDM43594.1
S23 ribosomal.
 
     0.810
EDM43586.1
phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
 
  0.794
EDM43593.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.768
EDM43591.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.751
EDM43592.1
Hypothetical protein.
 
     0.717
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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