STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDM43601.1Predicted hexapeptide repeat acetyltransferase; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily. (206 aa)    
Predicted Functional Partners:
EDM43597.1
Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases.
 
   
 0.834
EDM43602.1
Hypothetical protein; COG2827 Predicted endonuclease containing a URI domain.
       0.773
EDM43603.1
Dihydrolipoamide acetyltransferase; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
       0.773
EDM43599.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
     0.753
EDM45113.1
Carbonate dehydratase; COG0288 Carbonic anhydrase.
    
 0.715
EDM44371.1
COG0288 Carbonic anhydrase.
    
 0.715
EDM43604.1
(pyruvate) Oxoisovalerate Dehydrogenase Alpha and Beta Fusion; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
 
     0.678
EDM43595.1
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
   
 0.628
EDM43600.1
Hypothetical protein.
       0.594
EDM43591.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
     0.551
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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