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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43611.1Putative D-cysteine desulfhydrase (DcyD); COG2515 1-aminocyclopropane-1-carboxylate deaminase. (327 aa)    
Predicted Functional Partners:
EDM43612.1
Putative hemagglutinin; COG1705 Muramidase (flagellum-specific).
      0.899
hemL
HemL; COG0001 Glutamate-1-semialdehyde aminotransferase.
    
  0.888
EDM43791.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
  
  0.594
EDM43610.1
Putative phage tail protein.
       0.531
EDM44850.1
COG0671 Membrane-associated phospholipid phosphatase.
  
     0.417
EDM43122.1
Probable Methionine gamma-lyase; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
  
  
  0.407
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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