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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43617.1COG4682 Predicted membrane protein. (169 aa)    
Predicted Functional Partners:
EDM43619.1
Hypothetical protein; COG4929 Uncharacterized membrane-anchored protein.
 
     0.695
EDM43618.1
COG4872 Predicted membrane protein.
 
     0.683
EDM45430.1
Hypothetical protein; COG1061 DNA or RNA helicases of superfamily II.
  
     0.586
EDM45389.1
Hypothetical protein; COG2378 Predicted transcriptional regulator.
  
     0.549
EDM44943.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.461
EDM45703.1
Putative transmembrane protein.
  
     0.457
EDM43965.1
CHU large protein.
  
     0.411
EDM43616.1
Hypothetical protein.
       0.402
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.