STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43619.1Hypothetical protein; COG4929 Uncharacterized membrane-anchored protein. (191 aa)    
Predicted Functional Partners:
EDM43618.1
COG4872 Predicted membrane protein.
 
     0.954
EDM43617.1
COG4682 Predicted membrane protein.
 
     0.695
EDM45633.1
Hypothetical protein.
  
     0.669
EDM44132.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.542
EDM44530.1
COG5337 Spore coat assembly protein.
  
     0.418
EDM45389.1
Hypothetical protein; COG2378 Predicted transcriptional regulator.
  
     0.412
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.