STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43631.1COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family. (309 aa)    
Predicted Functional Partners:
EDM43630.1
Arginine decarboxylase, biosynthetic; COG1166 Arginine decarboxylase (spermidine biosynthesis).
 
 
 0.967
EDM43632.1
COG1899 Deoxyhypusine synthase.
 
   
 0.886
EDM44321.1
Hypothetical protein; COG0421 Spermidine synthase.
  
 
 0.843
EDM43038.1
COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.835
EDM43633.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
   
  0.821
argH
COG0165 Argininosuccinate lyase.
     
 0.799
EDM43646.1
COG2957 Peptidylarginine deiminase and related enzymes; Belongs to the agmatine deiminase family.
     
 0.797
EDM42868.1
COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
     
 0.795
EDM43289.1
COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
     
  0.788
EDM42866.1
COG0078 Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.771
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.