Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDM43642.1COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family. (288 aa)    
Predicted Functional Partners:
EDM43643.1
Hypothetical protein.
       0.647
EDM45480.1
COG3508 Homogentisate 1,2-dioxygenase.
 
     0.645
EDM43104.1
Phosphorylase family protein; COG2820 Uridine phosphorylase.
  
  
  0.606
EDM43641.1
COG0642 Signal transduction histidine kinase.
       0.603
ribB
Bifunctional protein: GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
  
 0.598
EDM43103.1
Hypothetical protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 
 0.575
EDM45557.1
Bifunctional protein: riboflavin kinase; COG0196 FAD synthase; Belongs to the ribF family.
    
  0.573
EDM45152.1
Hypothetical protein; COG0778 Nitroreductase.
  
 
 0.560
EDM42928.1
Hypothetical protein; COG0778 Nitroreductase.
  
 
 0.560
EDM44488.1
Nitroreductase family protein; COG0778 Nitroreductase.
  
 
 0.560
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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