Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43652.1Hypothetical protein; COG0471 Di- and tricarboxylate transporters. (87 aa)    
Predicted Functional Partners:
uppP
Putative bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.809
EDM43650.1
Hypothetical protein.
       0.773
EDM43030.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.768
EDM44721.1
Hypothetical protein.
  
     0.765
EDM44974.1
Hypothetical protein.
  
     0.758
EDM43510.1
Hypothetical protein.
  
     0.714
EDM43612.1
Putative hemagglutinin; COG1705 Muramidase (flagellum-specific).
  
     0.666
EDM44761.1
Hypothetical protein; COG0296 1,4-alpha-glucan branching enzyme.
  
     0.653
EDM43653.1
COG2177 Cell division protein; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.648
EDM44094.1
Putative methyltransferase; COG0742 N6-adenine-specific methylase.
  
    0.617
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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