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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43653.1COG2177 Cell division protein; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (292 aa)    
Predicted Functional Partners:
EDM43336.1
COG2884 Predicted ATPase involved in cell division.
 
 
 0.985
EDM45274.1
Putative peptidase; COG4942 Membrane-bound metallopeptidase.
 
 
 
 0.937
uppP
Putative bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
    0.619
EDM43652.1
Hypothetical protein; COG0471 Di- and tricarboxylate transporters.
       0.615
EDM43650.1
Hypothetical protein.
       0.580
mltG
Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
    0.499
leuS
COG0495 Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.472
truB
Pseudouridylate synthase (pseudouridine synthase); Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.457
mraZ
mraZ protein; COG2001 Uncharacterized protein conserved in bacteria; Belongs to the MraZ family.
  
   
 0.457
EDM45351.1
Putative peptidase; COG0739 Membrane proteins related to metalloendopeptidases.
 
    0.426
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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