Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM42905.1 | EDM43586.1 | SCB49_11432 | SCB49_08348 | Hypothetical protein. | phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.683 |
EDM42905.1 | EDM43668.1 | SCB49_11432 | SCB49_08758 | Hypothetical protein. | Hypothetical protein. | 0.864 |
EDM42905.1 | EDM45257.1 | SCB49_11432 | SCB49_05607 | Hypothetical protein. | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.683 |
EDM42910.1 | EDM43586.1 | SCB49_11457 | SCB49_08348 | Hypothetical protein. | phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.683 |
EDM42910.1 | EDM43668.1 | SCB49_11457 | SCB49_08758 | Hypothetical protein. | Hypothetical protein. | 0.880 |
EDM42910.1 | EDM45257.1 | SCB49_11457 | SCB49_05607 | Hypothetical protein. | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.683 |
EDM42910.1 | queE | SCB49_11457 | SCB49_01894 | Hypothetical protein. | Hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.498 |
EDM42983.1 | EDM43003.1 | SCB49_01727 | SCB49_12299 | Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. | Putative EPS related membrane protein; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.843 |
EDM42983.1 | EDM43668.1 | SCB49_01727 | SCB49_08758 | Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. | Hypothetical protein. | 0.643 |
EDM43003.1 | EDM42983.1 | SCB49_12299 | SCB49_01727 | Putative EPS related membrane protein; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. | Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.843 |
EDM43003.1 | EDM43668.1 | SCB49_12299 | SCB49_08758 | Putative EPS related membrane protein; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. | Hypothetical protein. | 0.643 |
EDM43586.1 | EDM42905.1 | SCB49_08348 | SCB49_11432 | phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | Hypothetical protein. | 0.683 |
EDM43586.1 | EDM42910.1 | SCB49_08348 | SCB49_11457 | phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | Hypothetical protein. | 0.683 |
EDM43586.1 | EDM43597.1 | SCB49_08348 | SCB49_08403 | phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | 0.995 |
EDM43586.1 | EDM43668.1 | SCB49_08348 | SCB49_08758 | phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | Hypothetical protein. | 0.701 |
EDM43586.1 | EDM44279.1 | SCB49_08348 | SCB49_04600 | phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.987 |
EDM43586.1 | EDM45257.1 | SCB49_08348 | SCB49_05607 | phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.713 |
EDM43597.1 | EDM43586.1 | SCB49_08403 | SCB49_08348 | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.995 |
EDM43597.1 | EDM43668.1 | SCB49_08403 | SCB49_08758 | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | Hypothetical protein. | 0.701 |
EDM43597.1 | EDM44279.1 | SCB49_08403 | SCB49_04600 | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.446 |
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