close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM43672.1Hypothetical protein; COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase. (353 aa)    
Predicted Functional Partners:
EDM43453.1
4-hydroxybenzoate-octaprenyltransferase; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
  
     0.720
EDM44972.1
Hypothetical protein.
  
     0.664
trmB
tRNA (guanine-N(7))-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.565
EDM45612.1
Hypothetical protein.
  
     0.564
EDM44259.1
Geranylgeranylglyceryl phosphate synthase-like protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).
  
     0.534
rnhB
Ribonuclease HII; COG1344 Flagellin and related hook-associated proteins.
  
     0.504
EDM42827.1
Hypothetical protein.
  
     0.501
EDM43675.1
COG3695 Predicted methylated DNA-protein cysteine methyltransferase.
       0.500
EDM43874.1
COG4122 Predicted O-methyltransferase.
  
     0.496
EDM43674.1
Hypothetical protein; COG1280 Putative threonine efflux protein.
       0.473
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.