STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43701.1COG2335 Secreted and surface protein containing fasciclin-like repeats. (200 aa)    
Predicted Functional Partners:
EDM43862.1
Beta-Ig-H3/fasciclin; COG2335 Secreted and surface protein containing fasciclin-like repeats.
 
    
0.654
EDM43521.1
beta-Ig-H3/fasciclin; COG2335 Secreted and surface protein containing fasciclin-like repeats.
  
     0.608
EDM43702.1
Hypothetical protein.
       0.519
EDM43703.1
Hypothetical protein.
       0.497
EDM43704.1
Hypothetical protein.
       0.487
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.