Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43707.1Hypothetical protein. (148 aa)    
Predicted Functional Partners:
EDM43712.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.996
EDM43706.1
Hypothetical protein.
 
     0.945
EDM43708.1
Hypothetical protein.
 
  
 0.915
EDM43710.1
COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.865
EDM43714.1
Cu(I)-translocating P-type ATPase; COG2217 Cation transport ATPase.
 
   
 0.822
EDM43711.1
Hypothetical protein.
 
 
 0.809
EDM43713.1
Hypothetical protein.
 
  
 0.767
EDM43709.1
COG0348 Polyferredoxin.
 
  
 0.745
EDM43705.1
Hypothetical protein.
       0.655
EDM45533.1
Hypothetical protein; COG2255 Holliday junction resolvasome, helicase subunit.
  
     0.645
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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