STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43714.1Cu(I)-translocating P-type ATPase; COG2217 Cation transport ATPase. (771 aa)    
Predicted Functional Partners:
EDM43712.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.938
EDM43713.1
Hypothetical protein.
 
  
 0.913
EDM43710.1
COG2010 Cytochrome c, mono- and diheme variants.
 
     0.904
EDM45013.1
Heavy metal transport/detoxification protein; COG2608 Copper chaperone.
 
 0.876
EDM45021.1
COG2217 Cation transport ATPase.
  
 0.859
EDM43709.1
COG0348 Polyferredoxin.
 
  
 0.859
EDM43707.1
Hypothetical protein.
 
   
 0.822
EDM43706.1
Hypothetical protein.
 
     0.808
EDM43711.1
Hypothetical protein.
 
     0.787
EDM45015.1
COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
     0.708
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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