STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43723.1Hypothetical protein; COG2017 Galactose mutarotase and related enzymes. (363 aa)    
Predicted Functional Partners:
EDM43724.1
Hypothetical protein.
 
     0.949
EDM44224.1
COG1843 Flagellar hook capping protein.
  
  
 0.761
EDM44103.1
Hypothetical protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
     0.704
EDM43466.1
Hypothetical protein; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases.
  
     0.695
EDM44024.1
Hypothetical protein.
  
     0.663
era-2
Putative GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.661
EDM44209.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.645
EDM44114.1
Hypothetical protein.
  
     0.624
EDM44570.1
Hypothetical protein.
  
     0.616
EDM45510.1
Hypothetical protein.
  
     0.589
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.