STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM43751.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
EDM43750.1
Gliding motility protein.
 
   
 0.856
EDM43752.1
GTPase EngB.
       0.778
EDM45511.1
Hypothetical protein.
  
     0.763
EDM44374.1
Hypothetical protein.
  
     0.762
EDM43085.1
Hypothetical protein.
  
     0.721
EDM43423.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.656
EDM42910.1
Hypothetical protein.
  
     0.634
EDM43749.1
NH(3)-dependent NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
       0.593
bshC
COG4365 Uncharacterized protein conserved in bacteria; Belongs to the BshC family.
  
     0.585
EDM42905.1
Hypothetical protein.
  
     0.564
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.